Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EED31349.1 | EED31356.1 | NOR53_2710 | NOR53_2674 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | 0.508 |
| EED31349.1 | holA | NOR53_2710 | NOR53_2484 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | [L] COG1466 DNA polymerase III, delta subunit. | 0.576 |
| EED31349.1 | leuS | NOR53_2710 | NOR53_2421 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | [J] COG0060 Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.575 |
| EED31349.1 | lnt | NOR53_2710 | NOR53_2615 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.862 |
| EED31349.1 | lptE | NOR53_2710 | NOR53_2861 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | Lipoprotein, putative; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.572 |
| EED31349.1 | miaB | NOR53_2710 | NOR53_2542 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.685 |
| EED31349.1 | tlyC | NOR53_2710 | NOR53_2640 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | Magnesium and cobalt efflux protein CorC; [R] COG0517 FOG: CBS domain. | 0.879 |
| EED31349.1 | ybeY | NOR53_2710 | NOR53_2647 | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | Putative metalloprotease H16_A0526; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.981 |
| EED31356.1 | EED31349.1 | NOR53_2674 | NOR53_2710 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | PhoH family protein; [T] COG1702 Phosphate starvation-inducible protein PhoH, predicted ATPase. | 0.508 |
| EED31356.1 | holA | NOR53_2674 | NOR53_2484 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | [L] COG1466 DNA polymerase III, delta subunit. | 0.775 |
| EED31356.1 | leuS | NOR53_2674 | NOR53_2421 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | [J] COG0060 Isoleucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.752 |
| EED31356.1 | lnt | NOR53_2674 | NOR53_2615 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.508 |
| EED31356.1 | lptE | NOR53_2674 | NOR53_2861 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | Lipoprotein, putative; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane. | 0.769 |
| EED31356.1 | miaB | NOR53_2674 | NOR53_2542 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine. | 0.432 |
| EED31356.1 | tlyC | NOR53_2674 | NOR53_2640 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | Magnesium and cobalt efflux protein CorC; [R] COG0517 FOG: CBS domain. | 0.508 |
| EED31356.1 | ybeY | NOR53_2674 | NOR53_2647 | Glutathione-dependent formaldehyde-activating, GFA; [S] COG3791 Uncharacterized conserved protein. | Putative metalloprotease H16_A0526; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.508 |
| NOR53_749 | comL | NOR53_749 | NOR53_70 | [V] COG0577 ABC-type antimicrobial peptide transport system, permease component. | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | 0.568 |
| NOR53_749 | lnt | NOR53_749 | NOR53_2615 | [V] COG0577 ABC-type antimicrobial peptide transport system, permease component. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.518 |
| comL | NOR53_749 | NOR53_70 | NOR53_749 | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | [V] COG0577 ABC-type antimicrobial peptide transport system, permease component. | 0.568 |
| comL | lnt | NOR53_70 | NOR53_2615 | Competence protein ComL; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. | Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. | 0.660 |
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