STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_262[L] COG0415 Deoxyribodipyrimidine photolyase; Belongs to the DNA photolyase family. (438 aa)    
Predicted Functional Partners:
NOR53_59
Photolyase; [R] COG3046 Uncharacterized protein related to deoxyribodipyrimidine photolyase.
 
   
 0.627
EED32138.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
 
     0.524
NOR53_190
[C] COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
       0.514
EED32301.1
Conserved hypothetical protein; [S] COG3752 Predicted membrane protein.
 
     0.492
EED33043.1
[K] COG0789 Predicted transcriptional regulators.
  
  
 0.441
NOR53_221
Superoxide dismutase (Fe); Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
   0.406
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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