Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31425.1Alcohol dehydrogenase, zinc-binding domain protein; [R] COG1064 Zn-dependent alcohol dehydrogenases. (326 aa)    
Predicted Functional Partners:
EED31428.1
ZbpA protein; [I] COG2030 Acyl dehydratase.
 0.935
EED31424.1
[C] COG1454 Alcohol dehydrogenase, class IV.
    
  0.815
EED31423.1
Thioesterase family protein domain protein; [R] COG0824 Predicted thioesterase.
 
     0.789
fabD
[I] COG0331 (acyl-carrier-protein) S-malonyltransferase.
 
   
  0.711
EED31427.1
Peroxisomal multifunctional enzyme type 2; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
  0.659
EED31429.1
[I] COG1960 Acyl-CoA dehydrogenases.
 
  0.658
fadD_2
[IQ] COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
  0.608
acaB
[I] COG0183 Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
    
  0.605
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
     
 0.600
fadJ
Fatty acid oxidation complex, alpha subunit; [I] COG1250 3-hydroxyacyl-CoA dehydrogenase.
  
 0.590
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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