STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31132.1Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components. (426 aa)    
Predicted Functional Partners:
dctQ
[G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
 
 0.998
EED31130.1
[G] COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
  
 0.970
EED31129.1
Conserved hypothetical protein.
 
     0.891
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
 
  
  0.672
EED32676.1
Putative methylmalonyl-CoA decarboxylasealpha-subunit; [I] COG0825 Acetyl-CoA carboxylase alpha subunit.
    
  0.668
EED32026.1
Trap dicarboxylate transporter- dctp subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
  
  
 0.634
EED32111.1
Transcriptional regulator, IclR-family; [K] COG1414 Transcriptional regulator.
 
  
  0.616
accC
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.609
EED33502.1
Cysteine-rich domain protein; [C] COG0247 Fe-S oxidoreductase.
     
 0.595
fabD
[I] COG0331 (acyl-carrier-protein) S-malonyltransferase.
  
 
 0.589
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.