STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_271Hypothetical protein. (247 aa)    
Predicted Functional Partners:
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.
       0.678
EED31615.1
Conserved hypothetical protein.
  
     0.667
EED34037.1
Conserved hypothetical protein.
  
     0.638
EED33039.1
[M] COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.605
NOR53_192
Hypothetical protein.
  
     0.566
NOR53_358
Hypothetical protein; [M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
     0.552
NOR53_265
Conserved hypothetical protein.
  
     0.551
EED33535.1
Hypothetical protein; Putative probable phytanoil-CoA alpha hydroxylase.
  
     0.540
NOR53_335
Diguanylate cyclase; [T] COG2199 FOG: GGDEF domain.
       0.529
EED32617.1
ABC transporter, permease protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.506
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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