STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31108.1Amidohydrolase; [Q] COG1228 Imidazolonepropionase and related amidohydrolases. (449 aa)    
Predicted Functional Partners:
NOR53_938
Amidohydrolase; [Q] COG1228 Imidazolonepropionase and related amidohydrolases.
  
     0.772
EED31107.1
Carbohydrate-selective porin, OprB family.
 
     0.728
EED31106.1
D-glutamate deacylase; [F] COG0044 Dihydroorotase and related cyclic amidohydrolases.
       0.524
EED31687.1
Amidohydrolase family enzyme; [FR] COG0402 Cytosine deaminase and related metal-dependent hydrolases.
  
     0.521
NOR53_618
[E] COG3741 N-formylglutamate amidohydrolase.
  
  
 0.472
EED31109.1
[P] COG0025 NhaP-type Na+/H+ and K+/H+ antiporters.
       0.444
speB_2
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
 
 0.437
speB_1
Agmatinase; [E] COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.
  
 
 0.437
EED31105.1
Hypothetical protein.
       0.428
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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