Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31374.1Conserved hypothetical protein. (251 aa)    
Predicted Functional Partners:
EED33476.1
Conserved hypothetical protein.
  
     0.773
EED31533.1
Conserved hypothetical protein.
  
     0.771
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.664
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.631
EED31531.1
Conserved hypothetical protein.
  
     0.591
EED32548.1
Conserved hypothetical protein.
  
     0.540
EED32190.1
Sulfotransferase; [R] COG0457 FOG: TPR repeat.
  
 
   0.527
dnaE2
Putative DNA polymerase III alpha subunit subfamily; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.515
EED32141.1
Conserved hypothetical protein.
  
     0.511
EED31700.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
  
     0.497
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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