STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31218.1Twin-arginine translocation pathway signal; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (640 aa)    
Predicted Functional Partners:
EED31217.1
Hypothetical protein; [K] COG1309 Transcriptional regulator; putative transcriptional regulatorTetR family taxon:392499.
 
     0.687
EED31219.1
Putative FAD dependent oxidoreductase; [E] COG0665 Glycine/D-amino acid oxidases (deaminating).
 
     0.516
EED31461.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.509
EED33348.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.503
EED31700.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
  
     0.493
EED33568.1
[S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.467
EED32548.1
Conserved hypothetical protein.
  
     0.430
EED33564.1
Gluconate 2-dehydrogenase cytochrome c subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
     0.408
EED33172.1
Putative exported protein; [S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.401
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.