Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31231.1Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives. (103 aa)    
Predicted Functional Partners:
EED31240.1
Transposase; [L] COG2801 Transposase and inactivated derivatives.
 
  
 0.768
EED31229.1
Integrase, catalytic region; [L] COG2826 Transposase and inactivated derivatives, IS30 family.
 
   
 0.766
EED31230.1
Hypothetical protein.
       0.727
EED31187.1
ISPpu14, transposase Orf3; [L] COG3436 Transposase and inactivated derivatives.
 
  
 0.537
EED31245.1
[L] COG3436 Transposase and inactivated derivatives.
 
  
 0.517
EED31988.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
 
  
 0.411
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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