STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31133.1[S] COG5361 Uncharacterized conserved protein. (515 aa)    
Predicted Functional Partners:
EED31083.1
Conserved hypothetical protein.
 
     0.753
EED31606.1
Conserved hypothetical protein.
     0.744
EED31107.1
Carbohydrate-selective porin, OprB family.
  
     0.692
EED32520.1
Conserved hypothetical protein.
  
     0.561
NOR53_831
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.514
EED31081.1
Conserved hypothetical protein; [C] COG4313 Protein involved in meta-pathway of phenol degradation.
  
     0.498
EED31078.1
Conserved hypothetical protein.
  
     0.458
EED31134.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
       0.456
NOR53_512
Sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
  
     0.440
EED32312.1
[P] COG3119 Arylsulfatase A and related enzymes.
  
     0.431
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.