Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31433.1OmpA/MotB domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (255 aa)    
Predicted Functional Partners:
NOR53_379
OmpA/MotB domain protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.796
EED33679.1
[N] COG1360 Flagellar motor protein.
  
 0.784
EED32644.1
Porin.
   
 0.776
NOR53_721
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
     
 0.767
flgC
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
   
   0.759
EED31467.1
[C] COG2863 Cytochrome c553.
   
 
 0.750
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
 
 0.732
NOR53_296
Flagellar motor protein; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 0.727
EED31677.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
  0.719
EED32460.1
Outer membrane protein; [S] COG2135 Uncharacterized conserved protein.
  
 
 0.709
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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