STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
flgK[N] COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family. (639 aa)    
Predicted Functional Partners:
flgJ
Flagellar rod assembly protein/muramidase FlgJ; [NU] COG1705 Muramidase (flagellum-specific).
 
  
 0.999
flgL
[N] COG1344 Flagellin and related hook-associated proteins; Belongs to the bacterial flagellin family.
 
  
 0.997
flgG
[N] COG1558 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
 
  
 0.995
flgH
Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
 
 0.994
flgE
[N] COG4786 Flagellar basal body rod protein.
 
  
 0.994
NOR53_247
FlgN protein; [NUO] COG3418 Flagellar biosynthesis/type III secretory pathway chaperone.
  
 
 0.993
EED32126.1
Hamp domain protein; [NT] COG0840 Methyl-accepting chemotaxis protein.
   
    0.993
NOR53_66
Flagellar protein FliS; [NUO] COG1516 Flagellin-specific chaperone FliS.
 
 
 0.993
NOR53_74
Flagellar hook capping protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
  
 0.993
NOR53_77
Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.
 
 
 0.993
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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