STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31533.1Conserved hypothetical protein. (248 aa)    
Predicted Functional Partners:
EED31374.1
Conserved hypothetical protein.
  
     0.771
EED32141.1
Conserved hypothetical protein.
  
     0.663
NOR53_643
Conserved domain protein.
  
     0.587
NOR53_767
Conserved domain protein.
  
     0.583
NOR53_585
TPR repeat-containing protein; [S] COG5616 Predicted integral membrane protein.
  
     0.569
EED32289.1
Conserved domain protein.
  
     0.562
EED32033.1
Conserved hypothetical protein.
 
    0.510
EED31700.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
  
     0.496
EED32142.1
TPR repeat-containing protein; [R] COG0457 FOG: TPR repeat.
  
     0.493
NOR53_522
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; BNR repeat, putative.
  
   0.487
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.