STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31470.1Conserved hypothetical protein, putative; [S] COG2911 Uncharacterized protein conserved in bacteria. (1262 aa)    
Predicted Functional Partners:
EED31471.1
[M] COG4775 Outer membrane protein/protective antigen OMA87.
 
 
 0.998
EED31472.1
Hypothetical protein.
       0.762
pilV
[NU] COG4967 Tfp pilus assembly protein PilV.
  
     0.545
NOR53_71
[NU] COG4966 Tfp pilus assembly protein PilW.
  
     0.513
pilY
[NU] COG3419 Tfp pilus assembly protein, tip-associated adhesin PilY1.
 
     0.489
EED31473.1
[E] COG0747 ABC-type dipeptide transport system, periplasmic component.
       0.425
EED31469.1
Hypothetical protein.
       0.418
yaeT
Outer membrane protein assembly complex, YaeT protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
     
 0.403
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.