Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31424.1[C] COG1454 Alcohol dehydrogenase, class IV. (388 aa)    
Predicted Functional Partners:
EED31423.1
Thioesterase family protein domain protein; [R] COG0824 Predicted thioesterase.
 
   
 0.864
EED32508.1
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; [ER] COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
    
 0.839
EED31425.1
Alcohol dehydrogenase, zinc-binding domain protein; [R] COG1064 Zn-dependent alcohol dehydrogenases.
    
  0.815
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 
 0.754
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
   
 
 0.749
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
   
 
 0.666
EED32422.1
2-oxoacid:ferredoxin/flavodoxin oxidoreductase, gamma subunit domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
  
 
 0.646
EED34014.1
[C] COG0371 Glycerol dehydrogenase and related enzymes.
 
  
 0.621
oadA
Oxaloacetate decarboxylase alpha subunit; [I] COG0511 Biotin carboxyl carrier protein.
    
  0.588
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
     
 0.567
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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