STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31481.1cytoChrome c oxidase Cbb3-type, subunit I; [PT] COG3712 Fe2+-dicitrate sensor, membrane component. (332 aa)    
Predicted Functional Partners:
EED31482.1
Sigma-70, region 4 type 2; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.980
NOR53_142
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.928
EED32869.1
TonB-dependent receptor, plug; [H] COG4206 Outer membrane cobalamin receptor protein.
 
 
 0.927
EED31480.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.909
EED33022.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.730
EED31702.1
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
  
 0.688
EED32546.1
Sigma-70, region 4 type 2; [K] COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
 0.680
EED31539.1
TonB dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.677
EED32862.1
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.671
EED31148.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
  
 0.660
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.