Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31550.1[S] COG2930 Uncharacterized conserved protein. (182 aa)    
Predicted Functional Partners:
EED32141.1
Conserved hypothetical protein.
  
     0.544
EED31551.1
Conserved hypothetical protein.
       0.504
oruR_1
Transcriptional regulator OruR; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
 
     0.471
EED33965.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
   
    0.417
EED31677.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
   
    0.417
glmS
Glutamine-fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
   
    0.416
EED31553.1
Alpha/beta superfamily hydrolase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
   
   0.415
NOR53_1
Teichoic acids export ATP-binding protein TagH; [V] COG1131 ABC-type multidrug transport system, ATPase component.
   
    0.406
wzt
ABC transporter ATP-binding protein; [P] COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
   
    0.406
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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