STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31597.1Ammonium transporter; [P] COG0004 Ammonia permease. (413 aa)    
Predicted Functional Partners:
EED31595.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.999
EED31598.1
[E] COG0347 Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
 0.999
glnL
Nitrogen regulation protein NR (II); [T] COG0642 Signal transduction histidine kinase.
  
 
 0.836
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
 
 0.835
EED33682.1
[T] COG0642 Signal transduction histidine kinase.
 
 
 0.796
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
 
  
 0.792
NOR53_215
[T] COG0642 Signal transduction histidine kinase.
 
 0.788
EED31642.1
Hdod domain family protein; [T] COG1639 Predicted signal transduction protein.
  
 
 0.702
bchL
Light-independent protochlorophyllide reductase, iron-sulfur ATP-binding protein; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.
  
  
 0.677
NOR53_65
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase; [T] COG2199 FOG: GGDEF domain.
 
   
 0.581
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.