STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32329.1[I] COG3239 Fatty acid desaturase. (312 aa)    
Predicted Functional Partners:
EED32330.1
PaaX domain protein, C-terminal domain; [K] COG3327 Phenylacetic acid-responsive transcriptional repressor.
 
     0.853
EED32850.1
Reductive dehalogenase; [C] COG1600 Uncharacterized Fe-S protein.
  
 
 0.824
EED31564.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.630
EED32803.1
[I] COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III.
 
  
 0.579
EED31551.1
Conserved hypothetical protein.
  
  
 0.578
erg
[I] COG3000 Sterol desaturase.
 
 
 0.568
EED31510.1
[I] COG1398 Fatty-acid desaturase.
  
 0.545
NOR53_525
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
  
  0.544
NOR53_349
[I] COG3000 Sterol desaturase.
 
 
 0.532
EED32331.1
[O] COG0625 Glutathione S-transferase.
       0.517
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.