Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31700.1[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name. (392 aa)    
Predicted Functional Partners:
EED31701.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
 
    
0.837
EED32548.1
Conserved hypothetical protein.
  
     0.593
EED31772.1
Acyltransferase family protein; [I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
  
  
  0.581
NOR53_148
Conserved hypothetical protein.
  
     0.563
hom
[E] COG0460 Homoserine dehydrogenase.
   
  0.552
EED33476.1
Conserved hypothetical protein.
  
     0.546
EED31702.1
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
       0.536
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.527
EED33023.1
Twin-arginine translocation pathway signal; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.499
phaF
Polyhydroxyalkanoate synthesis protein PhaF; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.499
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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