STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOR53_293Twin-arginine translocation pathway signal; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (637 aa)    
Predicted Functional Partners:
NOR53_278
Multi antimicrobial extrusion protein MatE; [V] COG0534 Na+-driven multidrug efflux pump.
  
    0.775
ggt_3
[E] COG0405 Gamma-glutamyltransferase.
       0.773
NOR53_897
[I] COG1562 Phytoene/squalene synthetase.
  
 
 0.695
NOR53_232
Hypothetical protein.
       0.548
EED33568.1
[S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.519
EED31461.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.494
EED33348.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.482
EED31700.1
[GEPR] COG0477 Permeases of the major facilitator superfamily; overlaps another CDS with the same product name.
  
     0.471
EED33172.1
Putative exported protein; [S] COG4315 Uncharacterized protein conserved in bacteria.
  
     0.451
EED33564.1
Gluconate 2-dehydrogenase cytochrome c subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
  
     0.431
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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