Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
EED31623.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (242 aa)    
Predicted Functional Partners:
EED33561.1
SapC family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.617
EED33345.1
Conserved hypothetical protein; [R] COG0730 Predicted permeases.
  
     0.603
EED33652.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.571
EED33559.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.566
EED31622.1
Hypothetical protein.
       0.558
EED33562.1
Tryptophan halogenase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.540
EED33563.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.530
EED32524.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name.
  
     0.463
EED32523.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport; overlaps another CDS with the same product name.
  
     0.460
glnL
Nitrogen regulation protein NR (II); [T] COG0642 Signal transduction histidine kinase.
  
    0.441
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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