Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31834.1[P] COG4772 Outer membrane receptor for Fe3+-dicitrate. (758 aa)    
Predicted Functional Partners:
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
 
 0.827
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.722
EED33341.1
Transporter, OMR family; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
 
  0.719
EED31832.1
Hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); alpha/beta hydrolase fold.
 
     0.716
EED31474.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.713
EED33993.1
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.701
EED31451.1
O-methyltransferase; [R] COG4798 Predicted methyltransferase.
  
     0.694
EED33597.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.677
EED32644.1
Porin.
  
  
  0.653
EED32965.1
TonB-dependent receptor, plug; [P] COG4771 Outer membrane receptor for ferrienterochelin and colicins.
  
     0.649
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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