STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpACarboxy-terminal processing protease; [R] COG3975 Predicted protease with the C-terminal PDZ domain; Belongs to the peptidase S41A family. (466 aa)    
Predicted Functional Partners:
EED32157.1
Membrane-bound metallopeptidase; [M] COG0739 Membrane proteins related to metalloendopeptidases.
 
    0.829
EED32155.1
Conserved hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.618
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.608
secD
Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.
  
 
  0.543
rseP
RIP metalloprotease RseP; [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
  
 0.506
EED32218.1
[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
     0.446
EED33571.1
Peptidase S41; [M] COG0793 Periplasmic protease.
  
     0.438
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
  
    0.423
EED32159.1
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
    0.420
lepB
[U] COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
     0.412
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.