Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ctpACarboxy-terminal processing protease; [R] COG3975 Predicted protease with the C-terminal PDZ domain; Belongs to the peptidase S41A family. (466 aa)    
Predicted Functional Partners:
EED32157.1
Membrane-bound metallopeptidase; [M] COG0739 Membrane proteins related to metalloendopeptidases.
 
  
 0.843
gpmI
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
 0.637
EED32155.1
Conserved hypothetical protein; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.618
rseP
RIP metalloprotease RseP; [M] COG0750 Predicted membrane-associated Zn-dependent proteases 1.
 
  
 0.524
EED33910.1
TPR domain protein; [R] COG0457 FOG: TPR repeat.
  
 
   0.470
EED32218.1
[M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
  
     0.446
EED33571.1
Peptidase S41; [M] COG0793 Periplasmic protease.
  
     0.438
grxC
Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
     
 0.438
EED32159.1
Rhodanese domain protein; [P] COG0607 Rhodanese-related sulfurtransferase.
  
    0.427
lepB
[U] COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
 
    0.421
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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