STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32080.1Lipoprotein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (292 aa)    
Predicted Functional Partners:
EED32079.1
Glyoxalase/bleomycin resistance protein/dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.766
NOR53_345
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
  
     0.618
NOR53_968
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.602
EED33151.1
[I] COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase.
  
     0.579
EED32903.1
[S] COG4805 Uncharacterized protein conserved in bacteria.
  
     0.569
EED31615.1
Conserved hypothetical protein.
  
     0.561
EED31435.1
Conserved hypothetical protein.
  
     0.544
EED33704.1
[MU] COG1538 Outer membrane protein.
  
     0.542
EED32078.1
[E] COG1115 Na+/alanine symporter.
       0.511
NOR53_192
Hypothetical protein.
  
     0.500
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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