STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31922.1Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (125 aa)    
Predicted Functional Partners:
NOR53_364
Phosphoglycerate mutase; [G] COG0406 Fructose-2,6-bisphosphatase.
  
     0.635
mutM
formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.
       0.634
NOR53_478
Hypothetical protein; [S] COG1357 Uncharacterized low-complexity proteins; pentapeptide repeat.
  
     0.626
NOR53_968
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.577
EED31568.1
Hypothetical protein; [J] COG0532 Translation initiation factor 2 (IF-2; GTPase).
  
     0.522
EED32178.1
Thioesterase superfamily protein; [R] COG0824 Predicted thioesterase.
  
     0.503
NOR53_140
Anti-sigma-28 factor, FlgM superfamily; [KNU] COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor).
  
     0.502
EED32760.1
UspA domain protein; [T] COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
  
     0.493
EED32175.1
Putative GTPase - translation elongation factor; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.493
EED32943.1
Conserved hypothetical protein.
  
     0.492
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.