Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EED31857.1 | EED31858.1 | NOR53_3298 | NOR53_3296 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.946 |
| EED31857.1 | EED31860.1 | NOR53_3298 | NOR53_3336 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | [U] COG0848 Biopolymer transport protein. | 0.899 |
| EED31857.1 | EED31861.1 | NOR53_3298 | NOR53_3338 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | Lipid A export ATP-binding/permease protein MsbA; [U] COG0811 Biopolymer transport proteins. | 0.895 |
| EED31857.1 | EED31862.1 | NOR53_3298 | NOR53_3029 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | TonB system biopolymer transport component; [U] COG0811 Biopolymer transport proteins; overlaps another CDS with the same product name. | 0.904 |
| EED31857.1 | EED31863.1 | NOR53_3298 | NOR53_3705 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | TonB system biopolymer transport component; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; overlaps another CDS with the same product name. | 0.918 |
| EED31857.1 | EED33189.1 | NOR53_3298 | NOR53_2225 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.644 |
| EED31857.1 | NOR53_712 | NOR53_3298 | NOR53_712 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.704 |
| EED31857.1 | exbD | NOR53_3298 | NOR53_3497 | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | [U] COG0848 Biopolymer transport protein. | 0.910 |
| EED31858.1 | EED31857.1 | NOR53_3296 | NOR53_3298 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | 0.946 |
| EED31858.1 | EED31860.1 | NOR53_3296 | NOR53_3336 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | [U] COG0848 Biopolymer transport protein. | 0.992 |
| EED31858.1 | EED31861.1 | NOR53_3296 | NOR53_3338 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Lipid A export ATP-binding/permease protein MsbA; [U] COG0811 Biopolymer transport proteins. | 0.970 |
| EED31858.1 | EED31862.1 | NOR53_3296 | NOR53_3029 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB system biopolymer transport component; [U] COG0811 Biopolymer transport proteins; overlaps another CDS with the same product name. | 0.968 |
| EED31858.1 | EED31863.1 | NOR53_3296 | NOR53_3705 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | TonB system biopolymer transport component; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit; overlaps another CDS with the same product name. | 0.919 |
| EED31858.1 | EED33058.1 | NOR53_3296 | NOR53_1478 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | [U] COG0848 Biopolymer transport protein. | 0.896 |
| EED31858.1 | EED33189.1 | NOR53_3296 | NOR53_2225 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.780 |
| EED31858.1 | NOR53_712 | NOR53_3296 | NOR53_712 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | [P] COG1629 Outer membrane receptor proteins, mostly Fe transport. | 0.847 |
| EED31858.1 | exbD | NOR53_3296 | NOR53_3497 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | [U] COG0848 Biopolymer transport protein. | 0.984 |
| EED31858.1 | tolR | NOR53_3296 | NOR53_2895 | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. | 0.896 |
| EED31860.1 | EED31857.1 | NOR53_3336 | NOR53_3298 | [U] COG0848 Biopolymer transport protein. | Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. | 0.899 |
| EED31860.1 | EED31858.1 | NOR53_3336 | NOR53_3296 | [U] COG0848 Biopolymer transport protein. | Periplasmic protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. | 0.992 |
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