STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31697.1Metallo-beta-lactamase domain protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases. (299 aa)    
Predicted Functional Partners:
EED31695.1
Isoquinoline 1-oxidoreductase beta subunit; [C] COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs.
       0.526
EED31696.1
Isoquinoline 1-oxidoreductase alpha subunit; [C] COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs.
       0.526
EED32969.1
Sulfide:quinone oxidoreductase; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
   
  0.491
EED31698.1
Tartrate dehydrogenase; [CE] COG0473 Isocitrate/isopropylmalate dehydrogenase.
       0.479
EED34003.1
Sulfide dehydrogenase (flavocytochrome c) flavoprotein chain; [C] COG1252 NADH dehydrogenase, FAD-containing subunit.
   
  0.431
dhaS
NADP-dependent aldehyde dehydrogenase; [G] COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; Belongs to the aldehyde dehydrogenase family.
  
    0.401
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.