Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31810.1Hypothetical protein. (74 aa)    
Predicted Functional Partners:
EED31811.1
ABC transporter, inner membrane protein; [V] COG0842 ABC-type multidrug transport system, permease component.
  
 0.964
EED32348.1
Glycine betaine/L-proline ABC transporter, permease and substrate-binding protein; [M] COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
     
  0.914
EED32833.1
[V] COG0842 ABC-type multidrug transport system, permease component.
  
 
 0.848
EED31812.1
Conserved hypothetical protein.
       0.779
EED32436.1
ABC transporter permease protein; [Q] COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.
    
 0.650
pstS
ABC superfamily (peri_bind) high-affinity phosphate transporter; [P] COG0226 ABC-type phosphate transport system, periplasmic component.
     
 0.641
atpC
ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  0.638
EED33409.1
[G] COG1653 ABC-type sugar transport system, periplasmic component.
     
 0.631
EED33406.1
[G] COG1175 ABC-type sugar transport systems, permease components.
     
 0.631
EED32687.1
Permease YjgP/YjgQ family protein; [R] COG0795 Predicted permeases.
   
 
  0.630
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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