Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EED31753.1Hypothetical protein; [U] COG0823 Periplasmic component of the Tol biopolymer transport system; WD40-like Beta Propeller Repeat. (817 aa)    
Predicted Functional Partners:
EED31664.1
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; [C] COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits.
     
  0.544
EED31754.1
Hypothetical protein.
       0.528
mxaF
Methanol dehydrogenase protein, large subunit; [C] COG2010 Cytochrome c, mono- and diheme variants.
   
 
 0.521
NOR53_636
Alcohol dehydrogenase (acceptor); [S] COG1520 FOG: WD40-like repeat.
   
 
 0.521
EED32033.1
Conserved hypothetical protein.
 
     0.491
EED31755.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.469
NOR53_592
Conserved hypothetical protein.
  
     0.468
EED32289.1
Conserved domain protein.
  
     0.405
NOR53_643
Conserved domain protein.
  
     0.401
NOR53_787
Hypothetical protein.
  
     0.401
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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