Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
NOR53_308Hypothetical protein. (253 aa)    
Predicted Functional Partners:
NOR53_376
Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
       0.769
NOR53_248
Conserved hypothetical protein.
  
     0.762
EED32460.1
Outer membrane protein; [S] COG2135 Uncharacterized conserved protein.
  
     0.739
NOR53_345
Tetratricopeptide repeat domain protein; [R] COG0457 FOG: TPR repeat.
  
     0.737
EED33036.1
leucyl/phenylalanyl-tRNA--protein transferase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.721
EED32681.1
Conserved hypothetical protein; [R] COG3897 Predicted methyltransferase.
  
     0.717
EED31931.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.707
EED31877.1
Conserved hypothetical protein TIGR02449; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.698
EED31857.1
Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat.
  
     0.691
NOR53_182
[L] COG2925 Exonuclease I.
       0.688
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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