STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31805.1[R] COG3217 Uncharacterized Fe-S protein; putative mosc domain-containing protein 1. taxon:9606. (265 aa)    
Predicted Functional Partners:
EED31694.1
[F] COG0167 Dihydroorotate dehydrogenase; Belongs to the dihydroorotate dehydrogenase family.
  
 
  0.846
EED31806.1
[V] COG1680 Beta-lactamase class C and other penicillin binding proteins.
       0.773
pdxH
Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).
 
      0.603
gor
Glutathione reductase; Maintains high levels of reduced glutathione.
       0.543
EED31804.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.512
EED31808.1
Hypothetical protein; [R] COG0730 Predicted permeases; putative Domain of unknown function.
       0.482
EED31809.1
ATP-binding protein of ABC transporter; [V] COG1131 ABC-type multidrug transport system, ATPase component.
    
  0.434
moaE
[H] COG0314 Molybdopterin converting factor, large subunit.
 
   
 0.407
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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