STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32295.1[S] COG3753 Uncharacterized protein conserved in bacteria. (138 aa)    
Predicted Functional Partners:
NOR53_969
Secretion protein HlyD; [M] COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
    0.617
NOR53_265
Conserved hypothetical protein.
  
     0.603
EED31615.1
Conserved hypothetical protein.
  
    0.549
gspJ_2
General secretion pathway protein J.
  
     0.541
NOR53_297
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.519
NOR53_41
Fimbrial assembly protein.
  
     0.503
EED32293.1
Major facilitator superfamily protein; [G] COG2211 Na+/melibiose symporter and related transporters.
 
     0.482
EED31440.1
Sensory transduction regulator; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.469
EED32294.1
Hydrolase; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
       0.453
EED31685.1
AsmA family protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
    0.449
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.