STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
azlC[E] COG1296 Predicted branched-chain amino acid permease (azaleucine resistance). (231 aa)    
Predicted Functional Partners:
NOR53_13
Branched-chain amino acid transport protein (AzlD); [S] COG4392 Predicted membrane protein.
 
  
 0.976
NOR53_18
Hypothetical protein; [R] COG1073 Hydrolases of the alpha/beta superfamily.
       0.559
NOR53_163
Hypothetical protein; [ET] COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative amino acid ABC transporterperiplasmic amino acid-binding protein taxon:380703; Belongs to the bacterial solute-binding protein 3 family.
  
     0.528
NOR53_745
[R] COG1279 Lysine efflux permease.
 
     0.457
EED33622.1
[GER] COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.
 
     0.430
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.