STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31703.1Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins. (350 aa)    
Predicted Functional Partners:
EED31134.1
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.774
NOR53_283
Transcriptional regulator, AraC family; [K] COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.774
EED31706.1
Glyoxalase family protein.
       0.773
EED31705.1
Glyoxalase family protein; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.773
EED31704.1
Bacilysin biosynthesis oxidoreductase BacC; [IQR] COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.773
EED32226.1
[E] COG0070 Glutamate synthase domain 3.
    
  0.646
EED33454.1
Putative Phosphate acetyl/butyryl transferase subfamily; [C] COG0281 Malic enzyme.
   
 
  0.608
EED31702.1
[P] COG4773 Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid.
 
     0.588
EED31707.1
Oxidoreductase, zinc-binding dehydrogenase family; [R] COG1064 Zn-dependent alcohol dehydrogenases.
       0.488
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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