Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31987.1Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives. (73 aa)    
Predicted Functional Partners:
EED31988.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
    0.968
EED31990.1
Hypothetical protein; Transposase IS3/.
 
     0.712
EED31240.1
Transposase; [L] COG2801 Transposase and inactivated derivatives.
 
    0.619
EED31986.1
Transposase IS3/family protein; [L] COG2801 Transposase and inactivated derivatives.
 
     0.600
EED31984.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
 
     0.576
EED31985.1
Integrase, catalytic region; [L] COG2801 Transposase and inactivated derivatives.
       0.499
EED31989.1
Hypothetical protein.
       0.442
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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