STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32030.1[S] COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family. (260 aa)    
Predicted Functional Partners:
EED32857.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
    0.842
NOR53_924
Transporter, MFS superfamily; [GEPR] COG0477 Permeases of the major facilitator superfamily.
   
    0.790
EED32032.1
Methylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.625
EED32031.1
Alpha/beta hydrolase fold-3 domain protein; [P] COG2072 Predicted flavoprotein involved in K+ transport.
       0.598
EED32029.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
       0.593
EED32028.1
Trap dicarboxylate transporter, dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.593
EED32027.1
[I] COG1607 Acyl-CoA hydrolase.
       0.465
mnmC
Oxidoreductase, FAD-binding; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.
 
     0.408
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.