Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EED31850.1Peptidase M28; [R] COG2234 Predicted aminopeptidases. (500 aa)    
Predicted Functional Partners:
EED31849.1
Hypothetical protein.
       0.773
EED33398.1
Fatty acyl-CoA hydrolase, medium chain (Thioesterase B); [I] COG0657 Esterase/lipase; Belongs to the type-B carboxylesterase/lipase family.
  
  0.646
EED32074.1
Liver carboxylesterase N; [I] COG0657 Esterase/lipase; Belongs to the type-B carboxylesterase/lipase family.
  
  0.646
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.642
EED31638.1
[S] COG4805 Uncharacterized protein conserved in bacteria; secreted protein containing.
  
     0.633
EED33707.1
RNA-metabolising metallo-beta-lactamase; [J] COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
   
 0.575
EED33331.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
    
 0.572
NOR53_535
[S] COG4805 Uncharacterized protein conserved in bacteria.
  
     0.565
EED33993.1
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
  
     0.560
EED31609.1
Transcription factor jumonji/aspartyl beta-hydroxylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.556
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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