Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EED31741.1[GEPR] COG0477 Permeases of the major facilitator superfamily. (487 aa)    
Predicted Functional Partners:
EED31740.1
[P] COG3119 Arylsulfatase A and related enzymes.
 
     0.567
hom
[E] COG0460 Homoserine dehydrogenase.
   
  0.552
EED32852.1
[GEPR] COG0477 Permeases of the major facilitator superfamily.
  
     0.530
EED33468.1
Transporter, OMR family; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.528
metH
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
   
 
  0.527
NOR53_236
Secretion protein HlyD; [V] COG1566 Multidrug resistance efflux pump.
  
  0.510
EED33765.1
P-protein; [E] COG1605 Chorismate mutase.
   
 
 0.489
EED31540.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.482
NOR53_160
RND efflux system, outer membrane lipoprotein, NodT; [MU] COG1538 Outer membrane protein.
  
  0.477
EED32191.1
TonB-dependent receptor, plug; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.475
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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