Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31677.1[M] COG1596 Periplasmic protein involved in polysaccharide export. (974 aa)    
Predicted Functional Partners:
EED31678.1
Chain length determinant protein.
 
 0.986
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.951
pal
OmpA/MotB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
  0.879
NOR53_721
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
  0.867
EED31672.1
Glycosyl transferase, WecB/TagA/CpsF family; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.863
EED31674.1
Glycosyl transferase, group 1; [M] COG0438 Glycosyltransferase.
  
 
 0.844
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.843
EED32346.1
Putative outer membrane protein; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
     
  0.837
EED33964.1
Polysaccharide chain length determinant protein; [L] COG0419 ATPase involved in DNA repair.
 
 0.829
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
    
 0.821
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.