Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
NOR53_32Sucrose phosphorylase; [G] COG0366 Glycosidases. (592 aa)    
Predicted Functional Partners:
NOR53_212
[M] COG0463 Glycosyltransferases involved in cell wall biogenesis.
   
 0.989
NOR53_120
Mannosyl-3-phosphoglycerate phosphatase family protein; [R] COG0561 Predicted hydrolases of the HAD superfamily.
 
   
 0.960
NOR53_195
Conserved hypothetical protein; [H] COG1072 Panthothenate kinase.
 
    0.850
NOR53_486
[E] COG0531 Amino acid transporters.
   
 0.835
EED32595.1
[E] COG0531 Amino acid transporters.
   
 0.802
EED33295.1
Amino acid permease family protein; [E] COG0531 Amino acid transporters.
   
 0.802
EED31786.1
Amino acid permease family protein; [E] COG0531 Amino acid transporters.
   
 0.802
aceF
Dihydrolipoyllysine-residue acetyltransferase E2 component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
  
    0.780
NOR53_998
Putative alpha-galactosidase 2 (Melibiase); [G] COG3345 Alpha-galactosidase.
  
 
 0.738
EED32558.1
[KG] COG1940 Transcriptional regulator/sugar kinase.
    
 0.732
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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