STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32032.1Methylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (200 aa)    
Predicted Functional Partners:
EED32031.1
Alpha/beta hydrolase fold-3 domain protein; [P] COG2072 Predicted flavoprotein involved in K+ transport.
       0.781
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.719
EED32030.1
[S] COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.625
spt
[HE] COG1932 Phosphoserine aminotransferase.
  
  
  0.453
EED32029.1
Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
       0.434
EED32028.1
Trap dicarboxylate transporter, dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
       0.434
EED31946.1
[S] COG3146 Uncharacterized protein conserved in bacteria.
 
     0.413
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
   
 
 0.404
gcvT
[E] COG0404 Glycine cleavage system T protein (aminomethyltransferase).
    
  0.401
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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