STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32116.1NADPH-dependent fmn reductase; [R] COG0655 Multimeric flavodoxin WrbA. (193 aa)    
Predicted Functional Partners:
EED32115.1
Putative glyoxalase/bleomycin resistance protein/dioxygenase; [E] COG0346 Lactoylglutathione lyase and related lyases.
       0.723
paaF
phenylacetate-CoA ligase; [H] COG1541 Coenzyme F390 synthetase.
       0.661
EED32118.1
[E] COG0620 Methionine synthase II (cobalamin-independent).
       0.652
EED32114.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
    0.617
NOR53_113
Ferritin and Dps; [P] COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.
  
  
 0.579
EED32053.1
[S] COG1652 Uncharacterized protein containing LysM domain.
   
  
 0.521
EED32119.1
Drug/metabolite transporter superfamily protein.
       0.463
EED31781.1
General stress protein 14; [R] COG2249 Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.462
EED32112.1
3-oxoadipate enol-lactone hydrolase; [R] COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
       0.419
EED32113.1
[C] COG0372 Citrate synthase.
       0.419
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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