STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31840.1[C] COG0584 Glycerophosphoryl diester phosphodiesterase. (325 aa)    
Predicted Functional Partners:
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.913
pgsA
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; [I] COG0558 Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
   
 0.776
EED31774.1
[P] COG1785 Alkaline phosphatase; Belongs to the alkaline phosphatase family.
  
 
 0.765
EED33300.1
[P] COG3540 Phosphodiesterase/alkaline phosphatase D.
  
 
 0.733
pyk
[G] COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.716
EED33331.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
 
 0.644
EED31841.1
[S] COG2315 Uncharacterized protein conserved in bacteria; protein containing.
       0.643
EED32601.1
Inositol-1-monophosphatase; [G] COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family.
    
 0.630
pstA
Phosphate ABC transporter, permease protein PstA; [P] COG4208 ABC-type sulfate transport system, permease component.
  
  
 0.630
EED32087.1
[R] COG1647 Esterase/lipase.
    
 0.630
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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