STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED31889.1Conserved hypothetical protein. (160 aa)    
Predicted Functional Partners:
EED32617.1
ABC transporter, permease protein, putative; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.768
NOR53_265
Conserved hypothetical protein.
  
     0.712
EED31615.1
Conserved hypothetical protein.
  
     0.699
EED34037.1
Conserved hypothetical protein.
  
     0.671
NOR53_228
Hypothetical protein.
  
     0.656
NOR53_192
Hypothetical protein.
  
     0.647
EED31804.1
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.638
EED31888.1
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.634
NOR53_73
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.631
EED33039.1
[M] COG2982 Uncharacterized protein involved in outer membrane biogenesis.
  
     0.622
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.