Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EED31678.1Chain length determinant protein. (316 aa)    
Predicted Functional Partners:
EED31677.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
 
 0.986
EED33978.1
Putative UDP-glucose lipid carrier transferase; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.893
EED31679.1
Glycosyl transferase WecB/TagA/CpsF family; [M] COG1922 Teichoic acid biosynthesis proteins; Belongs to the glycosyltransferase 26 family.
  
 
 0.845
EED33965.1
[M] COG1596 Periplasmic protein involved in polysaccharide export.
  
 0.795
EED31680.1
[R] COG1216 Predicted glycosyltransferases.
  
  
 0.792
EED33931.1
Conserved hypothetical protein.
  
 0.777
NOR53_57
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; [G] COG0662 Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.765
EED31681.1
Hypothetical protein.
       0.764
EED31672.1
Glycosyl transferase, WecB/TagA/CpsF family; [M] COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
  
 
 0.639
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
  
  
 0.622
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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