Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED31812.1Conserved hypothetical protein. (292 aa)    
Predicted Functional Partners:
EED31811.1
ABC transporter, inner membrane protein; [V] COG0842 ABC-type multidrug transport system, permease component.
 
     0.962
EED31809.1
ATP-binding protein of ABC transporter; [V] COG1131 ABC-type multidrug transport system, ATPase component.
 
     0.809
EED31810.1
Hypothetical protein.
       0.779
NOR53_707
Conserved hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.694
EED33790.1
[O] COG2214 DnaJ-class molecular chaperone.
  
     0.559
EED33501.1
Hypothetical protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
  
     0.522
EED32681.1
Conserved hypothetical protein; [R] COG3897 Predicted methyltransferase.
  
     0.521
EED31808.1
Hypothetical protein; [R] COG0730 Predicted permeases; putative Domain of unknown function.
       0.502
NOR53_41
Fimbrial assembly protein.
  
     0.476
EED31568.1
Hypothetical protein; [J] COG0532 Translation initiation factor 2 (IF-2; GTPase).
  
     0.468
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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