Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EED32223.1Type IV pilus secretin PilQ; [U] COG4964 Flp pilus assembly protein, secretin CpaC. (732 aa)    
Predicted Functional Partners:
EED32220.1
[NU] COG3166 Tfp pilus assembly protein PilN.
 
  
 0.955
EED32221.1
Type 4 fimbrial biogenesis protein PilO; [NU] COG3167 Tfp pilus assembly protein PilO.
 
  
 0.949
EED32219.1
[NU] COG4972 Tfp pilus assembly protein, ATPase PilM.
 
  
 0.948
EED32222.1
[NU] COG3168 Tfp pilus assembly protein PilP.
 
     0.943
gspC
General secretion pathway protein C; [U] COG3031 Type II secretory pathway, component PulC.
  
 
 0.790
aroK_1
Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.
       0.776
EED32053.1
[S] COG1652 Uncharacterized protein containing LysM domain.
  
    0.773
pilF
Type IV pilus biogenesis/stability protein PilW; [R] COG0457 FOG: TPR repeat.
  
  
  0.765
fliI
Flagellar protein export ATPase FliI; [C] COG0056 F0F1-type ATP synthase, alpha subunit.
  
 
 0.756
EED33004.1
[NU] COG3215 Tfp pilus assembly protein PilZ.
  
     0.746
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.