STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32029.1Tripartite ATP-independent periplasmic transporter, DctQ component; [G] COG3090 TRAP-type C4-dicarboxylate transport system, small permease component. (185 aa)    
Predicted Functional Partners:
EED32028.1
Trap dicarboxylate transporter, dctm subunit; [G] COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  
 0.960
EED32026.1
Trap dicarboxylate transporter- dctp subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
  
 0.806
EED32027.1
[I] COG1607 Acyl-CoA hydrolase.
       0.628
EED32030.1
[S] COG3022 Uncharacterized protein conserved in bacteria; Belongs to the UPF0246 family.
       0.593
EED31132.1
Trap dicarboxylate transporter, dctm subunit; [R] COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.544
EED32032.1
Methylase; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.
       0.434
EED32031.1
Alpha/beta hydrolase fold-3 domain protein; [P] COG2072 Predicted flavoprotein involved in K+ transport.
       0.432
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.