STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EED32123.1Tetratricopeptide TPR_2; [R] COG0457 FOG: TPR repeat. (781 aa)    
Predicted Functional Partners:
EED33208.1
[P] COG3119 Arylsulfatase A and related enzymes.
 
     0.711
NOR53_512
Sulfatase; [P] COG3119 Arylsulfatase A and related enzymes.
 
     0.705
EED32312.1
[P] COG3119 Arylsulfatase A and related enzymes.
 
     0.701
EED32468.1
Sulfatase family protein; [P] COG3119 Arylsulfatase A and related enzymes.
 
     0.700
EED31684.1
Sensor protein GacS; [T] COG0642 Signal transduction histidine kinase.
     
 0.616
ribB
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
  0.603
NOR53_60
Riboflavin biosynthesis protein ribAB; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.
    
  0.603
EED31082.1
Conserved hypothetical protein.
  
     0.592
EED31083.1
Conserved hypothetical protein.
  
     0.550
EED32124.1
[F] COG0518 GMP synthase - Glutamine amidotransferase domain.
       0.547
Your Current Organism:
gamma proteobacterium NOR53
NCBI taxonomy Id: 566466
Other names: g. proteobacterium NOR5-3, gamma proteobacterium NOR5-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.